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#ISEPpapers 24: April, May, and June 2024

Updated: 5 days ago

Your twenty-fourth digest of papers and preprints published by members of the International Society for Evolutionary Protistology is here. Do you like your #ISEPpapers as fresh as possible? Follow us on Mastodon or Bluesky. You can also join our Facebook group. Enjoy!




Diverse patterns of correspondence between protist metabarcodes and protist metagenome-assembled genomes. Daryna Zavadska, Nicolas Henry, Adrià Auladell, Cédric Berney, Daniel J. Richter. Read.



Characterization of the SUF FeS cluster synthesis machinery in the amitochondriate eukaryote Monocercomonoides exilis. Priscila Peña-Diaz, Joseph J. Braymer, Vojtěch Vacek, Marie Zelená, Stefano Lometto, Christopher-Nils Mais, Ivan Hrdý, Sebastian C. Treitli, Georg K. A. Hochberg, Béatrice Py, Roland Lill, Vladimír Hampl. Read.








Biotic interactions explain seasonal dynamics of the alpine soil microbiome. Anna Maria Fiore-Donno, Jule Freudenthal, Mathilde Borg Dahl, Christian Rixen, Tim Urich, Michael Bonkowski. Read.




Description and prevalence of gregarines infecting the amphipod Gammarus pulex, in the Water of Leith, Scotland, UK. Kevin McKinley, Anastasios D. Tsaousis, Sonja Rückert. Read.










The retromer and retriever systems are conserved and differentially expanded in parabasalids. Abhishek Prakash Shinde, Jitka Kučerová, Joel Bryan Dacks, Jan Tachezy. Read.








Comprehensive analysis of the microbial consortium in the culture of flagellate Monocercomonoides exilis. Alejandro Jiménez-González, Sebastian Cristian Treitli, Priscila Peña-Diaz, Anna Janovská, Vladimír Beneš, Petr Žáček, Vladimír Hampl. Read.









Foraging mechanisms in excavate flagellates shed light on the functional ecology of early eukaryotes. Sei Suzuki-Tellier, Federica Miano, Seyed Saeed Asadzadeh, Alastair G. B. Simpson, and Thomas Kiørboe. Read.












Divergent marine anaerobic ciliates harbor closely related Methanocorpusculum endosymbionts. Anna Schrecengost, Johana Rotterová, Katerina Poláková, Ivan Cepicka, Roxanne A. Beinart. Read.










Spatio-temporal changes of small protist and free-living bacterial communities in a temperate dimictic lake: insights from metabarcoding and machine learning. Michał Karlicki, Anna Bednarska, Paweł Hałakuc, Kacper Maciszewski, Anna Karnkowska. Read.








Genomic analyses of Symbiomonas scintillans show no evidence for endosymbiotic bacteria but does reveal the presence of giant viruses. Anna Cho, Gordon Lax, Samuel J. Livingston, Yumiko Masukagami, Mariia Naumova, Olivia Millar, Filip Husnik, Patrick J. Keeling. Read.






Single-cell genomics revealed Candidatus Grellia alia sp. nov. as an endosymbiont of Eutreptiella sp. (Euglenophyceae). Metody Hollender, Marta Sałek, Michał Karlicki, Anna Karnkowska. Read.







Coral-infecting parasites in cold marine ecosystems. Morelia Trznadel, Corey C. Holt, Samuel J. Livingston, Waldan K. Kwong, Patrick J. Keeling. Read.








Redescription and molecular phylogeny of the freshwater metopid, Castula strelkowi (Jankowski, 1964) from the Czech Republic and synonymization of Pileometopus with Castula. William Bourland, Ondřej Pomahač, Ivan Čepička. Read.








Phylogenomics reveals Adeleorina are an ancient and distinct subgroup of Apicomplexa. Claudia Campos, Gordon Lax, Waldan K. Kwong, Patrick J. Keeling. Read.






Redescription and molecular characterization of Loxocephalus luridus Eberhard, 1862 based on Czech populations: Implications for order Loxocephalida Jankowski, 1980. William Bourland, Ondřej Pomahač, Kateřina Poláková, Ivan Čepička. Read.








The impact of antibiotics on the presence of the protozoan anaerobe Blastocystis and the surrounding microbiome: a case study. Jamie M. Newton, William JS. Edwards, Gary Thompson, Eleni Gentekaki, Anastasios D. Tsaousis. Read.



Insights from comparative plastid genomics of colorless facultative pathogens Prototheca (Chlorophyta): Unveiling membrane transport and organelle division as key functions. Kacper Maciszewski, Gabriela Wilga, Tomasz Jagielski, Zofia Bakuła, Jan Gawor, Robert Gromadka, Anna Karnkowska. Read.



Biosynthesis of chlorophyll c in a dinoflagellate and heterologous production in planta. Robert E. Jinkerson, Daniel Poveda-Huertes, Elizabeth C. Cooney, Anna Cho, Rocio Ochoa-Fernandez, Patrick J. Keeling, Tingting Xiang, Johan Andersen-Ranberg. Read.

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